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VarScan 2.3.5

Variant detection in massively parallel sequencing data.


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For VarScan 2.3.5Publisher's description


VarScan is a Photo & Image software developed by Dan Koboldt. After our trial and test, the software is proved to be official, secure and free. Here is the official description for VarScan:

VarScan is a platform-independent, technology-independent software tool for identifying SNPs and indels in massively parallel sequencing of individual and pooled samples.

Given data for a single sample, VarScan identifies and filters germline variants based on read counts, base quality, and allele frequencyh.

Given data for a tumor-normal pair, VarScan also determines the somatic status of each variant (Germline, Somatic, or LOH) by comparing read counts between samples.
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