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TransposonPSI 06212007

an analysis tool to identify protein or nucleic acid sequence homology


Last Week downloads: 0
Total downloads: 175
  • Last Updated: Feb 19, 2008
  • License: Freeware Free
  • OS: Windows XP/2000/98/Me/NT
  • Requirements: No special requirements

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For TransposonPSI 06212007Publisher's description


TransposonPSI is a Home & Education software developed by After our trial and test, the software is proved to be official, secure and free. Here is the official description for TransposonPSI:

TransposonPSI is an Analysis tool to identify protein or nucleic Acid sequence homology to proteins encoded by diverse families of transposable elements. PSI-Blast is used with a collection of (retro-)transposon ORF homology Profiles to identify statistically significant alignments. This method can be used to identify potential transposon ORFs within a protein set, or to identify regions of transposon homology within a larger genome sequence. This is particularly useful to identify degenerate transposon homologies within genome sequences that escape identification and masking by using RepeatMasker and an associated nucleotide Library of repetitive elements. TransposonPSI has been routinely used at The Institute for Genomic Research to assist in the discovery of mobile elements across eukaryotes including protozoa, plants, fungi, and animals.
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