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pknotsRG 1.3

pknotsRG is a tool for folding RNA secondary structures.


Last Week downloads: 0
Total downloads: 86
  • Last Updated: Jun 20, 2011
  • License: Freeware Free
  • OS: Windows XP/2000/98
  • Requirements: No special requirements

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For pknotsRG 1.3Publisher's description


pknotsRG is a Photo & Image software developed by BiBiServ. After our trial and test, the software is proved to be official, secure and free. Here is the official description for pknotsRG:

Brothersoft Editor: pknotsRG is a tool for folding RNA secondary structures, including the class of simple recursive pseudoknots. The program runs in O(n^4) time and O(n^2) space, therefore its application here on the BiBiserv is limited to sequences of length up to 800 bases. The energy parameters for structures containing no pseudoknots are the same as in the actual mfold 3.1. The energy for pseudoknots is computed with a model Similar to that used by Rivas&Eddy in pknots. The folding temperature is fixed to 37C.
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