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GA Fuzzy Clustering 1.0 Download
GA Fuzzy Clustering 1.0
A clustering tool for microarray data
Last Week downloads: 0
Total downloads: 7
- Last Updated: Dec 20, 2011
- License: Freeware Free
- OS: Windows 7/Vista/XP
- Requirements: No special requirements
- Publisher: BioRainbow Group (3 more Applications)
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For GA Fuzzy Clustering 1.0Publisher's description
Input file format::
- This program uses a plain text file as input.
- All the data items must be separated by tabulators.
- No missing values are allowed.
Microarray:
- First line contains names of all columns.
- Each line (beginning with second) must have the gene name (1 column or more) and the expression values for each condition.
Distance matrix:
- First line contains caption (single word or a string in the 1st Position)
and names of elements
- Each line (beginning with second) must contain name of element (the same, as in the corresponding column) and values of distances Between this element and the others.
- Matrix is symmetric.
- All values are normalized (not greater than 1.0).
- Note: similarity matrix is also allowed.
Output file format:
- Parameters of the algorithm
- Distribution of genes in clusters (if membership is > 1/nuberOfClusters)
- Membership matrix for all genes
- Coordinates of centers of clusters (in the gene expression units) you can free download GA Fuzzy Clustering 1.0 now.
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